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Manganese in PDB 1jn2: Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A

Protein crystallography data

The structure of Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A, PDB code: 1jn2 was solved by M.Goel, D.Jain, K.J.Kaur, R.Kenoth, B.G.Maiya, M.J.Swamy, D.M.Salunke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 100.00 / 1.90
Space group F 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 106.000, 117.300, 126.000, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 23.2

Other elements in 1jn2:

The structure of Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A (pdb code 1jn2). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A, PDB code: 1jn2:

Manganese binding site 1 out of 1 in 1jn2

Go back to Manganese Binding Sites List in 1jn2
Manganese binding site 1 out of 1 in the Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of Meso-Tetrasulphonatophenyl Porphyrin Complexed with Concanavalin A within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Mn239

b:24.2
occ:1.00
OD2 P:ASP10 2.1 15.7 1.0
OE2 P:GLU8 2.2 24.0 1.0
NE2 P:HIS24 2.2 24.0 1.0
OD1 P:ASP19 2.3 28.2 1.0
CG P:ASP10 3.1 28.3 1.0
CE1 P:HIS24 3.1 22.8 1.0
CG P:ASP19 3.1 34.3 1.0
CD P:GLU8 3.2 33.5 1.0
CD2 P:HIS24 3.3 27.4 1.0
CB P:ASP10 3.5 26.3 1.0
OD2 P:ASP19 3.6 23.2 1.0
OE1 P:GLU8 3.6 24.1 1.0
OG P:SER34 4.1 31.1 1.0
CA P:CA238 4.2 24.6 1.0
OD1 P:ASP10 4.2 24.8 1.0
CB P:ASP19 4.3 33.9 1.0
ND1 P:HIS24 4.3 24.3 1.0
CG P:HIS24 4.4 24.8 1.0
CG P:GLU8 4.6 25.1 1.0
CA P:ASP19 4.6 32.5 1.0
O P:VAL32 4.8 29.4 1.0

Reference:

M.Goel, D.Jain, K.J.Kaur, R.Kenoth, B.G.Maiya, M.J.Swamy, D.M.Salunke. Functional Equality in the Absence of Structural Similarity: An Added Dimension to Molecular Mimicry J.Biol.Chem. V. 276 39277 2000.
ISSN: ISSN 0021-9258
PubMed: 11504727
DOI: 10.1074/JBC.M105387200
Page generated: Sat Oct 5 11:12:25 2024

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