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Manganese in PDB 1jlk: Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1

Protein crystallography data

The structure of Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1, PDB code: 1jlk was solved by Y.J.Im, S.-H.Rho, C.-M.Park, S.-S.Yang, J.-G.Kang, J.Y.Lee, P.-S.Song, S.H.Eom, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.70 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 40.511, 78.561, 43.710, 90.00, 107.68, 90.00
R / Rfree (%) 22.5 / 28.5

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1 (pdb code 1jlk). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1, PDB code: 1jlk:

Manganese binding site 1 out of 1 in 1jlk

Go back to Manganese Binding Sites List in 1jlk
Manganese binding site 1 out of 1 in the Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure of the Mn(2+)-Bound Form of Response Regulator RCP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn627

b:31.3
occ:1.00
O A:HOH671 2.1 11.3 1.0
OD1 A:ASP16 2.2 26.5 1.0
OD2 A:ASP68 2.3 22.1 1.0
O A:ASN70 2.4 25.2 1.0
O1 A:SO4624 2.6 44.5 1.0
O2 A:SO4624 2.7 43.8 1.0
OD2 A:ASP16 2.8 25.2 1.0
CG A:ASP16 2.9 25.6 1.0
CG A:ASP68 3.1 20.1 1.0
S A:SO4624 3.2 43.4 1.0
OD1 A:ASP68 3.4 20.1 1.0
C A:ASN70 3.5 25.1 1.0
OE2 A:GLU15 3.9 21.6 1.0
CB A:ASN70 4.1 27.1 1.0
CA A:ASN70 4.2 24.8 1.0
O3 A:SO4624 4.2 44.0 1.0
O4 A:SO4624 4.3 44.2 1.0
CB A:ASP16 4.4 23.6 1.0
CD2 A:LEU71 4.4 19.6 1.0
N A:LEU71 4.4 23.6 1.0
CB A:ASP68 4.4 19.6 1.0
N A:ASN70 4.5 23.2 1.0
CA A:LEU71 4.7 23.9 1.0
N A:ASP16 4.7 21.9 1.0
O A:HOH645 4.7 37.9 1.0
CD A:GLU15 4.8 22.5 1.0
OD1 A:ASN70 4.8 35.2 1.0
CG A:ASN70 4.8 31.3 1.0
OE1 A:GLU15 4.9 24.2 1.0
CA A:ASP16 5.0 24.6 1.0

Reference:

Y.J.Im, S.H.Rho, C.M.Park, S.S.Yang, J.G.Kang, J.Y.Lee, P.S.Song, S.H.Eom. Crystal Structure of A Cyanobacterial Phytochrome Response Regulator. Protein Sci. V. 11 614 2002.
ISSN: ISSN 0961-8368
PubMed: 11847283
DOI: 10.1110/PS.39102
Page generated: Sat Oct 5 11:11:39 2024

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