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Manganese in PDB 1ig1: 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn.

Protein crystallography data

The structure of 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn., PDB code: 1ig1 was solved by V.Tereshko, M.Teplova, J.Brunzelle, D.M.Watterson, M.Egli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.61 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.710, 62.340, 88.600, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 21.3

Manganese Binding Sites:

The binding sites of Manganese atom in the 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn. (pdb code 1ig1). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn., PDB code: 1ig1:

Manganese binding site 1 out of 1 in 1ig1

Go back to Manganese Binding Sites List in 1ig1
Manganese binding site 1 out of 1 in the 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn.


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of 1.8A X-Ray Structure of Ternary Complex of A Catalytic Domain of Death-Associated Protein Kinase with Atp Analogue and Mn. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn3510

b:23.6
occ:1.00
O2A A:ANP300 2.2 18.2 1.0
OD2 A:ASP161 2.3 20.7 1.0
O A:HOH2510 2.3 25.8 1.0
O2B A:ANP300 2.4 26.7 1.0
OD1 A:ASN144 2.4 16.9 1.0
O A:HOH3525 2.5 26.0 1.0
CG A:ASP161 3.1 18.4 1.0
PB A:ANP300 3.3 27.6 1.0
CG A:ASN144 3.4 15.0 1.0
PA A:ANP300 3.4 20.6 1.0
CB A:ASP161 3.5 15.8 1.0
O A:HOH2511 3.6 54.5 1.0
O3A A:ANP300 3.6 22.6 1.0
ND2 A:ASN144 3.7 15.0 1.0
O1B A:ANP300 3.8 27.8 1.0
O3' A:ANP300 4.1 20.3 1.0
OD1 A:ASP161 4.1 17.3 1.0
OE2 A:GLU143 4.2 38.1 1.0
O5' A:ANP300 4.4 18.7 1.0
C5' A:ANP300 4.5 18.8 1.0
O1A A:ANP300 4.5 16.8 1.0
O A:HOH2001 4.5 51.7 1.0
O A:HOH2027 4.5 50.6 1.0
OD2 A:ASP139 4.6 21.9 1.0
C3' A:ANP300 4.7 21.5 1.0
CD A:GLU143 4.7 37.0 1.0
CB A:ASN144 4.7 14.4 1.0
N3B A:ANP300 4.8 28.4 1.0
CG A:GLU143 4.9 32.6 1.0
O A:GLU143 4.9 17.9 1.0
CA A:ASP161 5.0 13.7 1.0
CE A:LYS141 5.0 22.9 1.0

Reference:

V.Tereshko, M.Teplova, J.Brunzelle, D.M.Watterson, M.Egli. Crystal Structures of the Catalytic Domain of Human Protein Kinase Associated with Apoptosis and Tumor Suppression. Nat.Struct.Biol. V. 8 899 2001.
ISSN: ISSN 1072-8368
PubMed: 11573098
DOI: 10.1038/NSB1001-899
Page generated: Sat Oct 5 11:00:32 2024

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