Manganese in PDB 1h7q: Dtdp-Manganese Complex of Spsa From Bacillus Subtilis

The structure of Dtdp-Manganese Complex of Spsa From Bacillus Subtilis, PDB code: 1h7q was solved by N.Tarbouriech, S.J.Charnock, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.0
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	47.372, 142.060, 81.425, 90.00, 90.00, 90.00
R / Rfree (%)	19.1 / 23.7

The structure of Dtdp-Manganese Complex of Spsa From Bacillus Subtilis also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Manganese atom in the Dtdp-Manganese Complex of Spsa From Bacillus Subtilis (pdb code 1h7q). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Dtdp-Manganese Complex of Spsa From Bacillus Subtilis, PDB code: 1h7q:

Manganese binding site 1 out of 1 in the Dtdp-Manganese Complex of Spsa From Bacillus Subtilis


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Dtdp-Manganese Complex of Spsa From Bacillus Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn1257 b:40.3 occ:1.00 O3B A:TYD1258 1.8 44.7 1.0 O A:HOH2177 2.0 29.4 1.0 OD2 A:ASP99 2.0 25.0 1.0 O2A A:TYD1258 2.1 26.8 1.0 CG A:ASP99 3.0 19.5 1.0 PB A:TYD1258 3.1 42.1 1.0 OD1 A:ASP99 3.2 22.8 1.0 PA A:TYD1258 3.4 28.4 1.0 O3A A:TYD1258 3.7 35.1 1.0 O1B A:TYD1258 3.8 44.6 1.0 NZ A:LYS13 4.2 25.4 1.0 O2B A:TYD1258 4.3 42.6 1.0 O1A A:TYD1258 4.4 29.6 1.0 CB A:ASP99 4.4 16.8 1.0 CE A:LYS13 4.5 25.2 1.0 O5' A:TYD1258 4.5 21.0 1.0 C5' A:TYD1258 4.7 15.1 1.0

N.Tarbouriech, S.J.Charnock, G.J.Davies. Three-Dimensional Structures of the Mn and Mg Dtdp Complexes of the Family Gt-2 Glycosyltransferase Spsa: A Comparison with Related Ndp-Sugar Glycosyltransferases. J.Mol.Biol. V. 314 655 2001.
ISSN: ISSN 0022-2836
PubMed: 11733986
DOI: 10.1006/JMBI.2001.5159