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Manganese in PDB 1fe1: Crystal Structure Photosystem II

Protein crystallography data

The structure of Crystal Structure Photosystem II, PDB code: 1fe1 was solved by A.Zouni, H.-T.Witt, J.Kern, P.Fromme, N.Krauss, W.Saenger, P.Orth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 130.010, 226.720, 308.290, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 1fe1:

The structure of Crystal Structure Photosystem II also contains other interesting chemical elements:

Cadmium (Cd) 2 atoms
Magnesium (Mg) 64 atoms
Iron (Fe) 6 atoms

Manganese Binding Sites:

The binding sites of Manganese atom in the Crystal Structure Photosystem II (pdb code 1fe1). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 8 binding sites of Manganese where determined in the Crystal Structure Photosystem II, PDB code: 1fe1:
Jump to Manganese binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Manganese binding site 1 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 1 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn170

b:45.9
occ:1.00
 MN A:MN173 3.0 45.9 1.0
MN A:MN172 3.0 45.9 1.0

Manganese binding site 2 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 2 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn171

b:45.9
occ:1.00
 MN A:MN173 2.8 45.9 1.0
MN A:MN172 4.6 45.9 1.0

Manganese binding site 3 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 3 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn172

b:45.9
occ:1.00
 MN A:MN173 2.8 45.9 1.0
MN A:MN170 3.0 45.9 1.0
MN A:MN171 4.6 45.9 1.0

Manganese binding site 4 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 4 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 4 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn173

b:45.9
occ:1.00
 MN A:MN171 2.8 45.9 1.0
MN A:MN172 2.8 45.9 1.0
MN A:MN170 3.0 45.9 1.0

Manganese binding site 5 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 5 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 5 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mn170

b:45.9
occ:1.00
 MN J:MN173 3.0 45.9 1.0
MN J:MN172 3.0 45.9 1.0

Manganese binding site 6 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 6 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 6 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mn171

b:45.9
occ:1.00
 MN J:MN173 2.8 45.9 1.0
MN J:MN172 4.6 45.9 1.0

Manganese binding site 7 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 7 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 7 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mn172

b:45.9
occ:1.00
 MN J:MN173 2.8 45.9 1.0
MN J:MN170 3.0 45.9 1.0
MN J:MN171 4.6 45.9 1.0

Manganese binding site 8 out of 8 in 1fe1

Go back to Manganese Binding Sites List in 1fe1
Manganese binding site 8 out of 8 in the Crystal Structure Photosystem II


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 8 of Crystal Structure Photosystem II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mn173

b:45.9
occ:1.00
 MN J:MN171 2.8 45.9 1.0
MN J:MN172 2.8 45.9 1.0
MN J:MN170 3.0 45.9 1.0

Reference:

A.Zouni, H.T.Witt, J.Kern, P.Fromme, N.Krauss, W.Saenger, P.Orth. Crystal Structure of Photosystem II From Synechococcus Elongatus at 3.8 A Resolution. Nature V. 409 739 2001.
ISSN: ISSN 0028-0836
PubMed: 11217865
DOI: 10.1038/35055589
Page generated: Sat Oct 5 10:21:57 2024

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