Manganese in PDB 9g6g: Semi-Active Psii Dimer From Native PEAK4 Psii Dimers

All present enzymatic activity of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers:
1.10.3.9;

The structure of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers also contains other interesting chemical elements:

Calcium	(Ca)	2 atoms
Magnesium	(Mg)	70 atoms
Iron	(Fe)	5 atoms
Chlorine	(Cl)	3 atoms

The binding sites of Manganese atom in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers (pdb code 9g6g). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total 4 binding sites of Manganese where determined in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers, PDB code: 9g6g:
Jump to Manganese binding site number: 1; 2; 3; 4;

Manganese binding site 1 out of 4 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn414 b:43.2 occ:1.00 MN1 A:OEX414 0.0 43.2 1.0 OE2 A:GLU189 1.8 35.3 1.0 O3 A:OEX414 1.8 33.2 1.0 O1 A:OEX414 1.9 38.8 1.0 NE2 A:HIS332 2.2 28.5 1.0 OD2 A:ASP342 2.2 34.6 1.0 O5 A:OEX414 2.6 31.0 1.0 MN2 A:OEX414 2.8 40.4 1.0 CD A:GLU189 3.0 31.9 1.0 CD2 A:HIS332 3.1 23.4 1.0 CG A:ASP342 3.1 32.0 1.0 CE1 A:HIS332 3.2 24.6 1.0 MN3 A:OEX414 3.3 39.2 1.0 OD1 A:ASP342 3.4 34.9 1.0 CA1 A:OEX414 3.5 31.7 1.0 O2 A:OEX414 3.7 32.4 1.0 OE1 A:GLU189 3.8 32.5 1.0 CG A:GLU189 3.9 25.6 1.0 NE2 A:HIS337 3.9 28.2 1.0 OE1 A:GLU333 4.2 35.6 1.0 ND1 A:HIS332 4.3 25.2 1.0 CG A:HIS332 4.3 23.9 1.0 CE1 A:HIS337 4.4 26.6 1.0 CB A:ASP342 4.5 31.3 1.0 OE1 C:GLU342 4.5 35.0 1.0 O A:HOH564 4.6 28.8 1.0 OE2 C:GLU342 4.6 32.8 1.0 CG1 A:VAL185 4.7 19.9 1.0 CD A:GLU333 4.7 33.0 1.0 O A:ALA344 4.9 38.0 1.0 C A:ALA344 4.9 41.0 1.0 OE2 A:GLU333 4.9 38.5 1.0

Manganese binding site 2 out of 4 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 2 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn414 b:40.4 occ:1.00 MN2 A:OEX414 0.0 40.4 1.0 O1 A:OEX414 2.1 38.8 1.0 OE1 C:GLU342 2.1 35.0 1.0 O3 A:OEX414 2.1 33.2 1.0 O2 A:OEX414 2.1 32.4 1.0 OD1 A:ASP342 2.2 34.9 1.0 MN1 A:OEX414 2.8 43.2 1.0 C A:ALA344 2.8 41.0 1.0 MN3 A:OEX414 2.9 39.2 1.0 CD C:GLU342 3.0 31.5 1.0 CG A:ASP342 3.1 32.0 1.0 OE2 C:GLU342 3.2 32.8 1.0 O A:ALA344 3.2 38.0 1.0 OD2 A:ASP342 3.3 34.6 1.0 CA1 A:OEX414 3.4 31.7 1.0 NE2 A:HIS337 3.7 28.2 1.0 O5 A:OEX414 3.8 31.0 1.0 O C:HOH691 4.1 34.0 1.0 OE2 A:GLU189 4.1 35.3 1.0 CA A:ALA344 4.1 39.8 1.0 N A:ALA344 4.3 42.8 1.0 CD2 A:HIS337 4.3 25.5 1.0 CG C:GLU342 4.4 26.6 1.0 CB A:ASP342 4.5 31.3 1.0 OE1 A:GLU333 4.5 35.6 1.0 O4 A:OEX414 4.5 35.8 1.0 NE2 A:HIS332 4.7 28.5 1.0 CB C:GLU342 4.8 25.3 1.0 CA A:ASP342 4.8 31.3 1.0 CE1 A:HIS337 4.9 26.6 1.0 C A:ASP342 4.9 33.6 1.0 O C:HOH710 4.9 29.9 1.0

Manganese binding site 3 out of 4 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 3 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn414 b:39.2 occ:1.00 MN3 A:OEX414 0.0 39.2 1.0 O2 A:OEX414 1.9 32.4 1.0 OE1 A:GLU333 2.0 35.6 1.0 O4 A:OEX414 2.1 35.8 1.0 O3 A:OEX414 2.1 33.2 1.0 OE2 C:GLU342 2.2 32.8 1.0 O5 A:OEX414 2.4 31.0 1.0 CD A:GLU333 2.8 33.0 1.0 MN2 A:OEX414 2.9 40.4 1.0 OE2 A:GLU333 3.0 38.5 1.0 MN4 A:OEX414 3.0 50.3 1.0 CD C:GLU342 3.2 31.5 1.0 MN1 A:OEX414 3.3 43.2 1.0 CA1 A:OEX414 3.4 31.7 1.0 OE1 C:GLU342 3.4 35.0 1.0 O1 A:OEX414 3.5 38.8 1.0 O C:HOH645 3.9 28.1 1.0 OD1 A:ASP170 4.1 31.5 1.0 O A:HOH501 4.2 30.9 1.0 CG A:GLU333 4.2 27.5 1.0 NE2 A:HIS337 4.2 28.2 1.0 NH2 C:ARG345 4.2 25.3 1.0 NE2 A:HIS332 4.4 28.5 1.0 OE2 A:GLU189 4.4 35.3 1.0 CG C:GLU342 4.5 26.6 1.0 O A:HOH546 4.5 33.0 1.0 OD2 A:ASP170 4.6 32.5 1.0 CD2 A:HIS332 4.6 23.4 1.0 CB A:GLU333 4.6 25.9 1.0 O A:ALA344 4.7 38.0 1.0 OD1 A:ASP342 4.7 34.9 1.0 CE1 A:HIS337 4.7 26.6 1.0 O A:HOH564 4.8 28.8 1.0 CG A:ASP170 4.8 28.8 1.0 OD2 A:ASP342 4.9 34.6 1.0

Manganese binding site 4 out of 4 in the Semi-Active Psii Dimer From Native PEAK4 Psii Dimers


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 4 of Semi-Active Psii Dimer From Native PEAK4 Psii Dimers within 5.0Å range: probe atom residue distance (Å) B Occ A:Mn414 b:50.3 occ:1.00 MN4 A:OEX414 0.0 50.3 1.0 O4 A:OEX414 2.1 35.8 1.0 OD1 A:ASP170 2.1 31.5 1.0 OE2 A:GLU333 2.2 38.5 1.0 O A:HOH546 2.2 33.0 1.0 O5 A:OEX414 2.5 31.0 1.0 O A:HOH609 3.0 30.1 1.0 MN3 A:OEX414 3.0 39.2 1.0 CG A:ASP170 3.2 28.8 1.0 CD A:GLU333 3.2 33.0 1.0 OE1 A:GLU333 3.5 35.6 1.0 O A:HOH564 3.6 28.8 1.0 O A:HOH501 3.6 30.9 1.0 OD2 A:ASP170 3.7 32.5 1.0 CA1 A:OEX414 3.7 31.7 1.0 O2 A:OEX414 3.8 32.4 1.0 O A:HOH536 4.2 23.2 1.0 CB A:ASP170 4.3 21.2 1.0 CA A:ASP170 4.3 18.9 1.0 CG A:GLU333 4.5 27.5 1.0 O A:HOH538 4.5 33.2 1.0 O A:SER169 4.6 22.8 1.0 NH2 C:ARG345 4.6 25.3 1.0 O A:HOH581 4.6 31.2 1.0 O3 A:OEX414 4.7 33.2 1.0 N A:ASP170 4.8 19.0 1.0 OE2 C:GLU342 4.9 32.8 1.0 OD1 A:ASP61 4.9 38.8 1.0 C A:SER169 4.9 19.4 1.0

Z.Zhao, I.Vercellino, P.J.Nixon, L.A.Sazanov. Semi-Active Psii Dimer From the PEAK4 Psii Dimers To Be Published.