Manganese in PDB 9j1a: Structure of Cona Without Ligand

Protein crystallography data

The structure of Structure of Cona Without Ligand, PDB code: 9j1a was solved by L.Li, G.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.19 / 1.48
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 62.239, 87.413, 88.959, 90, 90, 90
R / Rfree (%) 18.4 / 21.3

Other elements in 9j1a:

The structure of Structure of Cona Without Ligand also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Manganese Binding Sites:

The binding sites of Manganese atom in the Structure of Cona Without Ligand (pdb code 9j1a). This binding sites where shown within 5.0 Angstroms radius around Manganese atom.
In total only one binding site of Manganese was determined in the Structure of Cona Without Ligand, PDB code: 9j1a:

Manganese binding site 1 out of 1 in 9j1a

Go back to Manganese Binding Sites List in 9j1a
Manganese binding site 1 out of 1 in the Structure of Cona Without Ligand


Mono view


Stereo pair view

A full contact list of Manganese with other atoms in the Mn binding site number 1 of Structure of Cona Without Ligand within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mn402

b:10.4
occ:1.00
OD2 A:ASP10 2.0 10.9 1.0
OE2 A:GLU8 2.1 11.3 1.0
O A:HOH517 2.1 13.4 1.0
NE2 A:HIS24 2.1 12.0 1.0
O A:HOH546 2.2 12.9 1.0
OD1 A:ASP19 2.2 12.8 1.0
CE1 A:HIS24 3.1 10.4 1.0
CG A:ASP10 3.1 12.0 1.0
CG A:ASP19 3.1 14.6 1.0
CD A:GLU8 3.1 11.9 1.0
CD2 A:HIS24 3.2 11.6 1.0
OE1 A:GLU8 3.5 12.9 1.0
CB A:ASP10 3.5 11.5 1.0
OD2 A:ASP19 3.6 13.7 1.0
O A:HOH576 3.9 12.7 1.0
OG A:SER34 4.1 13.6 1.0
CA A:CA403 4.2 11.0 1.0
OD1 A:ASP10 4.2 13.0 1.0
ND1 A:HIS24 4.2 11.4 1.0
CB A:ASP19 4.3 13.8 1.0
CG A:HIS24 4.3 10.9 1.0
CG A:GLU8 4.5 12.4 1.0
O A:VAL32 4.6 14.8 1.0
CA A:ASP19 4.6 14.8 1.0

Reference:

L.Li, G.Chen. Structure of Cona Without Ligand To Be Published.
Page generated: Tue Dec 10 21:08:12 2024

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